Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rph3aP47708 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rph3aP47708 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rph3aP47708 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rph3aP47708 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rph3aP47708 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rph3aP47708 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rph3aP47708 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rph3aP47708 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Rph3aP47708 Map1b-203ENSMUST00000223725 2669 ntBASIC12.43□□□□□ -0.42
Rph3aP47708 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rph3aP47708 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rph3aP47708 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Rph3aP47708 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rph3aP47708 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rph3aP47708 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.42□□□□□ -0.42
Rph3aP47708 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rph3aP47708 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.42□□□□□ -0.42
Rph3aP47708 Gm13123-201ENSMUST00000122173 492 ntBASIC12.42□□□□□ -0.42
Rph3aP47708 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.42□□□□□ -0.42
Rph3aP47708 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.42□□□□□ -0.42
Rph3aP47708 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.42□□□□□ -0.42
Rph3aP47708 Gm29649-201ENSMUST00000185649 419 ntBASIC12.42□□□□□ -0.42
Rph3aP47708 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.42□□□□□ -0.42
Rph3aP47708 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.42□□□□□ -0.42
Rph3aP47708 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Gm6091-201ENSMUST00000098307 165 ntBASIC12.42□□□□□ -0.42
Rph3aP47708 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.42□□□□□ -0.42
Rph3aP47708 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rph3aP47708 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rph3aP47708 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rph3aP47708 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rph3aP47708 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rph3aP47708 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.42□□□□□ -0.42
Rph3aP47708 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.41□□□□□ -0.42
Rph3aP47708 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.41□□□□□ -0.42
Rph3aP47708 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.41□□□□□ -0.42
Rph3aP47708 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.41□□□□□ -0.42
Rph3aP47708 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rph3aP47708 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rph3aP47708 Gm8805-201ENSMUST00000117848 313 ntBASIC12.41□□□□□ -0.42
Rph3aP47708 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.41□□□□□ -0.42
Rph3aP47708 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.41□□□□□ -0.42
Rph3aP47708 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.41□□□□□ -0.42
Rph3aP47708 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
Rph3aP47708 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.41□□□□□ -0.42
Rph3aP47708 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.41□□□□□ -0.42
Rph3aP47708 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.41□□□□□ -0.42
Rph3aP47708 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rph3aP47708 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.41□□□□□ -0.42
Rph3aP47708 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms