Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.78□□□□□ -0.36
LdlrP35951 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Matn2-203ENSMUST00000226766 3252 ntBASIC12.78□□□□□ -0.36
LdlrP35951 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.78□□□□□ -0.36
LdlrP35951 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
LdlrP35951 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.78□□□□□ -0.36
LdlrP35951 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.78□□□□□ -0.36
LdlrP35951 Gm2495-201ENSMUST00000191160 466 ntBASIC12.78□□□□□ -0.36
LdlrP35951 Gm37424-201ENSMUST00000191727 561 ntBASIC12.78□□□□□ -0.36
LdlrP35951 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.78□□□□□ -0.36
LdlrP35951 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.78□□□□□ -0.36
LdlrP35951 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
LdlrP35951 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Gm10478-201ENSMUST00000084451 396 ntBASIC12.78□□□□□ -0.36
LdlrP35951 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.78□□□□□ -0.36
LdlrP35951 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
LdlrP35951 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LdlrP35951 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LdlrP35951 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LdlrP35951 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LdlrP35951 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LdlrP35951 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LdlrP35951 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LdlrP35951 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LdlrP35951 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
LdlrP35951 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LdlrP35951 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
LdlrP35951 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
LdlrP35951 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Mir1247-201ENSMUST00000116706 82 ntBASIC12.77□□□□□ -0.37
LdlrP35951 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
LdlrP35951 Gm27486-201ENSMUST00000184923 80 ntBASIC12.77□□□□□ -0.37
LdlrP35951 Gm42693-201ENSMUST00000196779 631 ntBASIC12.77□□□□□ -0.37
LdlrP35951 Gm8463-201ENSMUST00000208573 613 ntBASIC12.77□□□□□ -0.37
LdlrP35951 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.77□□□□□ -0.37
LdlrP35951 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.77□□□□□ -0.37
LdlrP35951 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LdlrP35951 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.76□□□□□ -0.37
LdlrP35951 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
LdlrP35951 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.76□□□□□ -0.37
LdlrP35951 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LdlrP35951 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LdlrP35951 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.76□□□□□ -0.37
LdlrP35951 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms