Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col2a1P28481 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col2a1P28481 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Col2a1P28481 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Mir6979-201ENSMUST00000183927 56 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm29615-201ENSMUST00000185371 697 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm28224-201ENSMUST00000186078 697 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm29001-201ENSMUST00000186177 697 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm28292-201ENSMUST00000186593 697 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm28101-201ENSMUST00000187608 697 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm29076-201ENSMUST00000187689 697 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm28302-201ENSMUST00000187931 697 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm28646-201ENSMUST00000188220 697 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm28205-201ENSMUST00000189177 697 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm29032-201ENSMUST00000189797 697 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm28695-201ENSMUST00000190300 697 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm37448-201ENSMUST00000192795 697 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.36□□□□□ -0.11
Col2a1P28481 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.36□□□□□ -0.11
Col2a1P28481 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Col2a1P28481 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Col2a1P28481 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Gm23949-201ENSMUST00000104027 127 ntBASIC14.35□□□□□ -0.11
Col2a1P28481 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Col2a1P28481 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.35□□□□□ -0.11
Col2a1P28481 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.35□□□□□ -0.11
Col2a1P28481 B9d1os-201ENSMUST00000137010 674 ntBASIC14.35□□□□□ -0.11
Col2a1P28481 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.35□□□□□ -0.11
Col2a1P28481 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.35□□□□□ -0.11
Col2a1P28481 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.35□□□□□ -0.11
Col2a1P28481 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.35□□□□□ -0.11
Col2a1P28481 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Col2a1P28481 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Col2a1P28481 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Col2a1P28481 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.34□□□□□ -0.11
Col2a1P28481 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.34□□□□□ -0.11
Col2a1P28481 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.34□□□□□ -0.11
Col2a1P28481 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Col2a1P28481 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.34□□□□□ -0.11
Col2a1P28481 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Col2a1P28481 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.34□□□□□ -0.11
Col2a1P28481 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.34□□□□□ -0.11
Col2a1P28481 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Col2a1P28481 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.34□□□□□ -0.11
Col2a1P28481 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Col2a1P28481 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Col2a1P28481 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Col2a1P28481 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms