Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Ccl6P27784 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10□□□□□ -0.81
Ccl6P27784 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10□□□□□ -0.81
Ccl6P27784 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC10□□□□□ -0.81
Ccl6P27784 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10□□□□□ -0.81
Ccl6P27784 Gm11424-201ENSMUST00000121929 829 ntBASIC10□□□□□ -0.81
Ccl6P27784 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10□□□□□ -0.81
Ccl6P27784 Gm27892-201ENSMUST00000185017 106 ntBASIC10□□□□□ -0.81
Ccl6P27784 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10□□□□□ -0.81
Ccl6P27784 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10□□□□□ -0.81
Ccl6P27784 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10□□□□□ -0.81
Ccl6P27784 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10□□□□□ -0.81
Ccl6P27784 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10□□□□□ -0.81
Ccl6P27784 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10□□□□□ -0.81
Ccl6P27784 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC10□□□□□ -0.81
Ccl6P27784 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Ccl6P27784 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Ccl6P27784 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ccl6P27784 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccl6P27784 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Gm15222-202ENSMUST00000228667 1726 ntBASIC9.99□□□□□ -0.81
Ccl6P27784 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Mypopos-202ENSMUST00000205975 2321 ntBASIC9.99□□□□□ -0.81
Ccl6P27784 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Ccl6P27784 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Ccl6P27784 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Gm13369-201ENSMUST00000119442 987 ntBASIC9.99□□□□□ -0.81
Ccl6P27784 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Gm8810-201ENSMUST00000172895 754 ntBASIC9.99□□□□□ -0.81
Ccl6P27784 Proscos-202ENSMUST00000178990 666 ntBASIC9.99□□□□□ -0.81
Ccl6P27784 Gm8652-201ENSMUST00000181363 964 ntBASIC9.99□□□□□ -0.81
Ccl6P27784 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC9.99□□□□□ -0.81
Ccl6P27784 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 AC154276.1-201ENSMUST00000228874 1299 ntBASIC9.99□□□□□ -0.81
Ccl6P27784 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Ccl6P27784 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ccl6P27784 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Ccl6P27784 Gm37472-201ENSMUST00000192342 4052 ntBASIC9.98□□□□□ -0.81
Ccl6P27784 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl6P27784 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl6P27784 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccl6P27784 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Ccl6P27784 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl6P27784 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl6P27784 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl6P27784 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl6P27784 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl6P27784 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl6P27784 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ccl6P27784 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl6P27784 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccl6P27784 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl6P27784 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.98□□□□□ -0.81
Ccl6P27784 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccl6P27784 Gm11803-201ENSMUST00000119966 444 ntBASIC9.98□□□□□ -0.81
Ccl6P27784 Gm12539-201ENSMUST00000121549 1098 ntBASIC9.98□□□□□ -0.81
Ccl6P27784 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms