Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
BdnfP21237 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.34□□□□□ -0.43
BdnfP21237 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.34□□□□□ -0.43
BdnfP21237 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.34□□□□□ -0.43
BdnfP21237 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.34□□□□□ -0.43
BdnfP21237 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
BdnfP21237 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
BdnfP21237 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
BdnfP21237 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
BdnfP21237 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.33□□□□□ -0.44
BdnfP21237 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
BdnfP21237 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
BdnfP21237 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
BdnfP21237 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
BdnfP21237 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.33□□□□□ -0.44
BdnfP21237 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.33□□□□□ -0.44
BdnfP21237 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.33□□□□□ -0.44
BdnfP21237 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.33□□□□□ -0.44
BdnfP21237 Gm26315-201ENSMUST00000083890 321 ntBASIC12.33□□□□□ -0.44
BdnfP21237 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.33□□□□□ -0.44
BdnfP21237 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
BdnfP21237 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.32□□□□□ -0.44
BdnfP21237 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
BdnfP21237 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
BdnfP21237 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
BdnfP21237 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
BdnfP21237 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
BdnfP21237 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.32□□□□□ -0.44
BdnfP21237 Gm12341-201ENSMUST00000119724 503 ntBASIC12.32□□□□□ -0.44
BdnfP21237 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
BdnfP21237 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.32□□□□□ -0.44
BdnfP21237 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.32□□□□□ -0.44
BdnfP21237 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.32□□□□□ -0.44
BdnfP21237 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
BdnfP21237 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.32□□□□□ -0.44
BdnfP21237 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
BdnfP21237 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
BdnfP21237 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.32□□□□□ -0.44
BdnfP21237 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.32□□□□□ -0.44
BdnfP21237 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.32□□□□□ -0.44
BdnfP21237 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.32□□□□□ -0.44
BdnfP21237 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
BdnfP21237 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
BdnfP21237 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms