Protein–RNA interactions for Protein: P20615

Hoxb9, Homeobox protein Hox-B9, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb9P20615 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Gm26035-201ENSMUST00000083065 308 ntBASIC12.27□□□□□ -0.45
Hoxb9P20615 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Hoxb9P20615 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.27□□□□□ -0.45
Hoxb9P20615 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.27□□□□□ -0.45
Hoxb9P20615 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.27□□□□□ -0.45
Hoxb9P20615 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hoxb9P20615 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.27□□□□□ -0.45
Hoxb9P20615 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Hoxb9P20615 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Hoxb9P20615 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Hoxb9P20615 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxb9P20615 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Hoxb9P20615 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.26□□□□□ -0.45
Hoxb9P20615 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.26□□□□□ -0.45
Hoxb9P20615 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.26□□□□□ -0.45
Hoxb9P20615 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
Hoxb9P20615 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.26□□□□□ -0.45
Hoxb9P20615 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Gm15703-201ENSMUST00000120250 880 ntBASIC12.26□□□□□ -0.45
Hoxb9P20615 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Hoxb9P20615 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Hoxb9P20615 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.26□□□□□ -0.45
Hoxb9P20615 Gm43818-201ENSMUST00000200605 466 ntBASIC12.26□□□□□ -0.45
Hoxb9P20615 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.26□□□□□ -0.45
Hoxb9P20615 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.26□□□□□ -0.45
Hoxb9P20615 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.26□□□□□ -0.45
Hoxb9P20615 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxb9P20615 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.26□□□□□ -0.45
Hoxb9P20615 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Hoxb9P20615 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxb9P20615 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Hoxb9P20615 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.26□□□□□ -0.45
Hoxb9P20615 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Hoxb9P20615 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxb9P20615 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxb9P20615 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.25□□□□□ -0.45
Hoxb9P20615 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxb9P20615 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxb9P20615 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxb9P20615 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxb9P20615 Gm4984-201ENSMUST00000115987 360 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms