Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccl3P10855 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccl3P10855 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ccl3P10855 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccl3P10855 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.29□□□□□ -0.6
Ccl3P10855 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Gm44100-201ENSMUST00000204329 436 ntBASIC11.29□□□□□ -0.6
Ccl3P10855 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccl3P10855 Gm45598-202ENSMUST00000210719 986 ntBASIC11.29□□□□□ -0.6
Ccl3P10855 Gm29787-201ENSMUST00000222129 849 ntBASIC11.29□□□□□ -0.6
Ccl3P10855 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Gm10076-201ENSMUST00000073238 384 ntBASIC11.29□□□□□ -0.6
Ccl3P10855 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccl3P10855 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Ccl3P10855 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccl3P10855 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccl3P10855 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ccl3P10855 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl3P10855 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.28□□□□□ -0.6
Ccl3P10855 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl3P10855 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl3P10855 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl3P10855 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.28□□□□□ -0.6
Ccl3P10855 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccl3P10855 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Gm13813-201ENSMUST00000120998 787 ntBASIC11.28□□□□□ -0.6
Ccl3P10855 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.28□□□□□ -0.6
Ccl3P10855 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Gm17040-202ENSMUST00000170597 889 ntBASIC11.28□□□□□ -0.6
Ccl3P10855 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Ccl3P10855 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.28□□□□□ -0.6
Ccl3P10855 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.28□□□□□ -0.6
Ccl3P10855 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccl3P10855 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ccl3P10855 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.28□□□□□ -0.6
Ccl3P10855 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.28□□□□□ -0.6
Ccl3P10855 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl3P10855 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ccl3P10855 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Ccl3P10855 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Ccl3P10855 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ccl3P10855 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl3P10855 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl3P10855 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl3P10855 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl3P10855 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl3P10855 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.27□□□□□ -0.6
Ccl3P10855 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl3P10855 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl3P10855 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl3P10855 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Ccl3P10855 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl3P10855 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Ccl3P10855 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ccl3P10855 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Ccl3P10855 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ccl3P10855 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 248.8 ms