Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC19.02■□□□□ 0.64
NclP09405 Gm18056-201ENSMUST00000207670 568 ntBASIC19.02■□□□□ 0.64
NclP09405 Gm18061-201ENSMUST00000208350 562 ntBASIC19.02■□□□□ 0.64
NclP09405 Gm18063-201ENSMUST00000208529 568 ntBASIC19.02■□□□□ 0.64
NclP09405 Gm18052-201ENSMUST00000208750 559 ntBASIC19.02■□□□□ 0.64
NclP09405 Gm6082-201ENSMUST00000215204 454 ntBASIC19.02■□□□□ 0.64
NclP09405 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Gm22058-201ENSMUST00000083393 310 ntBASIC19.02■□□□□ 0.64
NclP09405 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NclP09405 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NclP09405 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
NclP09405 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NclP09405 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NclP09405 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
NclP09405 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NclP09405 Gm6015-201ENSMUST00000217493 1586 ntBASIC19.02■□□□□ 0.63
NclP09405 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NclP09405 Gm4366-201ENSMUST00000201488 1342 ntBASIC19.01■□□□□ 0.63
NclP09405 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Gm37019-201ENSMUST00000192133 2134 ntBASIC19.01■□□□□ 0.63
NclP09405 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 AC122314.1-201ENSMUST00000223056 2239 ntBASIC19.01■□□□□ 0.63
NclP09405 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Gm44207-201ENSMUST00000204568 1424 ntBASIC19.01■□□□□ 0.63
NclP09405 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC19.01■□□□□ 0.63
NclP09405 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC19.01■□□□□ 0.63
NclP09405 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC19.01■□□□□ 0.63
NclP09405 Gm2546-201ENSMUST00000182630 991 ntBASIC19.01■□□□□ 0.63
NclP09405 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC19.01■□□□□ 0.63
NclP09405 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC19.01■□□□□ 0.63
NclP09405 AC093022.1-201ENSMUST00000226949 1072 ntBASIC19.01■□□□□ 0.63
NclP09405 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NclP09405 Mir339-201ENSMUST00000083659 96 ntBASIC19.01■□□□□ 0.63
NclP09405 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC19.01■□□□□ 0.63
NclP09405 Gm19221-201ENSMUST00000221827 1477 ntBASIC19.01■□□□□ 0.63
NclP09405 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NclP09405 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NclP09405 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC19■□□□□ 0.63
NclP09405 Gm37827-201ENSMUST00000194486 1542 ntBASIC19■□□□□ 0.63
NclP09405 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC19■□□□□ 0.63
NclP09405 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NclP09405 Gm9004-201ENSMUST00000218739 1222 ntBASIC19■□□□□ 0.63
NclP09405 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC19■□□□□ 0.63
NclP09405 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC19■□□□□ 0.63
NclP09405 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC19■□□□□ 0.63
NclP09405 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NclP09405 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NclP09405 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NclP09405 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
NclP09405 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NclP09405 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC18.99■□□□□ 0.63
NclP09405 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NclP09405 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NclP09405 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NclP09405 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NclP09405 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
NclP09405 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
NclP09405 Gm12749-201ENSMUST00000122138 1159 ntBASIC18.99■□□□□ 0.63
NclP09405 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NclP09405 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC18.99■□□□□ 0.63
NclP09405 Gm31256-201ENSMUST00000194705 506 ntBASIC18.99■□□□□ 0.63
NclP09405 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC18.99■□□□□ 0.63
NclP09405 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
NclP09405 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NclP09405 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NclP09405 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NclP09405 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NclP09405 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NclP09405 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms