Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.77□□□□□ -0.68
Hoxa3P02831 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hoxa3P02831 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hoxa3P02831 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hoxa3P02831 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hoxa3P02831 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hoxa3P02831 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Hoxa3P02831 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Hoxa3P02831 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.77□□□□□ -0.68
Hoxa3P02831 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Hoxa3P02831 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm11793-201ENSMUST00000120433 981 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm11637-201ENSMUST00000120601 592 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm12329-201ENSMUST00000120829 1007 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.77□□□□□ -0.69
Hoxa3P02831 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Hoxa3P02831 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.77□□□□□ -0.69
Hoxa3P02831 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.77□□□□□ -0.69
Hoxa3P02831 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Hoxa3P02831 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm43579-201ENSMUST00000202387 1307 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.77□□□□□ -0.69
Hoxa3P02831 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.77□□□□□ -0.69
Hoxa3P02831 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Hoxa3P02831 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC10.76□□□□□ -0.69
Hoxa3P02831 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Hoxa3P02831 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.76□□□□□ -0.69
Hoxa3P02831 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.76□□□□□ -0.69
Hoxa3P02831 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Gm44985-201ENSMUST00000206202 1016 ntBASIC10.76□□□□□ -0.69
Hoxa3P02831 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.76□□□□□ -0.69
Hoxa3P02831 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.76□□□□□ -0.69
Hoxa3P02831 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.76□□□□□ -0.69
Hoxa3P02831 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Hoxa3P02831 n-R5s195-201ENSMUST00000082891 119 ntBASIC10.76□□□□□ -0.69
Hoxa3P02831 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.76□□□□□ -0.69
Hoxa3P02831 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Hoxa3P02831 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms