Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.07□□□□□ -0.16
Trdmt1O55055 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.07□□□□□ -0.16
Trdmt1O55055 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.07□□□□□ -0.16
Trdmt1O55055 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.07□□□□□ -0.16
Trdmt1O55055 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.07□□□□□ -0.16
Trdmt1O55055 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Trdmt1O55055 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.07□□□□□ -0.16
Trdmt1O55055 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trdmt1O55055 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trdmt1O55055 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Gm14644-201ENSMUST00000116671 647 ntBASIC14.06□□□□□ -0.16
Trdmt1O55055 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.06□□□□□ -0.16
Trdmt1O55055 Gm17040-202ENSMUST00000170597 889 ntBASIC14.06□□□□□ -0.16
Trdmt1O55055 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Gm20426-201ENSMUST00000173657 440 ntBASIC14.06□□□□□ -0.16
Trdmt1O55055 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Trdmt1O55055 Gm5523-201ENSMUST00000180415 997 ntBASIC14.06□□□□□ -0.16
Trdmt1O55055 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.06□□□□□ -0.16
Trdmt1O55055 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.06□□□□□ -0.16
Trdmt1O55055 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC14.06□□□□□ -0.16
Trdmt1O55055 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trdmt1O55055 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.06□□□□□ -0.16
Trdmt1O55055 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trdmt1O55055 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trdmt1O55055 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.05□□□□□ -0.16
Trdmt1O55055 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trdmt1O55055 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.05□□□□□ -0.16
Trdmt1O55055 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms