Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Matn3O35701 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Matn3O35701 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.66□□□□□ -0.54
Matn3O35701 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.66□□□□□ -0.54
Matn3O35701 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Gm12403-201ENSMUST00000121384 959 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Matn3O35701 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC11.66□□□□□ -0.54
Matn3O35701 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.66□□□□□ -0.54
Matn3O35701 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Gm18766-201ENSMUST00000189811 808 ntBASIC11.66□□□□□ -0.54
Matn3O35701 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Gm5779-201ENSMUST00000218467 910 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Gm5186-201ENSMUST00000218781 920 ntBASIC11.66□□□□□ -0.54
Matn3O35701 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Matn3O35701 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.66□□□□□ -0.54
Matn3O35701 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Matn3O35701 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.66□□□□□ -0.54
Matn3O35701 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Matn3O35701 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Matn3O35701 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Matn3O35701 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Matn3O35701 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.65□□□□□ -0.54
Matn3O35701 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Matn3O35701 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Matn3O35701 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Matn3O35701 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Matn3O35701 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.65□□□□□ -0.54
Matn3O35701 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Gm9824-201ENSMUST00000178707 561 ntBASIC11.65□□□□□ -0.54
Matn3O35701 Gm4804-201ENSMUST00000182234 999 ntBASIC11.65□□□□□ -0.54
Matn3O35701 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.65□□□□□ -0.54
Matn3O35701 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.65□□□□□ -0.54
Matn3O35701 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Matn3O35701 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.65□□□□□ -0.54
Matn3O35701 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Matn3O35701 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms