Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Polr1aO35134 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Gm14460-201ENSMUST00000121511 639 ntBASIC19.35■□□□□ 0.69
Polr1aO35134 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
Polr1aO35134 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Polr1aO35134 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Polr1aO35134 Gm38058-201ENSMUST00000194323 4368 ntBASIC19.35■□□□□ 0.69
Polr1aO35134 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC19.34■□□□□ 0.69
Polr1aO35134 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Polr1aO35134 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC19.34■□□□□ 0.69
Polr1aO35134 Gm8956-201ENSMUST00000203939 825 ntBASIC19.34■□□□□ 0.69
Polr1aO35134 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Polr1aO35134 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Polr1aO35134 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Polr1aO35134 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Polr1aO35134 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Polr1aO35134 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Gm7722-201ENSMUST00000120646 741 ntBASIC19.34■□□□□ 0.69
Polr1aO35134 Gm12164-201ENSMUST00000121695 551 ntBASIC19.34■□□□□ 0.69
Polr1aO35134 Gm6397-201ENSMUST00000161973 1069 ntBASIC19.34■□□□□ 0.69
Polr1aO35134 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Polr1aO35134 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Gm18711-201ENSMUST00000199341 750 ntBASIC19.34■□□□□ 0.69
Polr1aO35134 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 AC153505.1-201ENSMUST00000218819 1071 ntBASIC19.34■□□□□ 0.69
Polr1aO35134 AC140293.1-201ENSMUST00000225626 1247 ntBASIC19.34■□□□□ 0.69
Polr1aO35134 Gm7551-201ENSMUST00000089593 1074 ntBASIC19.34■□□□□ 0.69
Polr1aO35134 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Polr1aO35134 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC19.34■□□□□ 0.69
Polr1aO35134 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Polr1aO35134 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Polr1aO35134 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
Polr1aO35134 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Polr1aO35134 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Polr1aO35134 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Polr1aO35134 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Polr1aO35134 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Polr1aO35134 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC19.33■□□□□ 0.69
Polr1aO35134 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC19.33■□□□□ 0.69
Polr1aO35134 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Polr1aO35134 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Polr1aO35134 Gm5419-201ENSMUST00000119301 527 ntBASIC19.33■□□□□ 0.68
Polr1aO35134 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Polr1aO35134 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Polr1aO35134 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Polr1aO35134 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Polr1aO35134 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Polr1aO35134 Gm4735-201ENSMUST00000138679 1302 ntBASIC19.32■□□□□ 0.68
Polr1aO35134 Gm5855-201ENSMUST00000200240 1305 ntBASIC19.32■□□□□ 0.68
Polr1aO35134 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr1aO35134 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr1aO35134 AC130671.2-201ENSMUST00000227224 1621 ntBASIC19.32■□□□□ 0.68
Polr1aO35134 AC151895.1-201ENSMUST00000219025 1742 ntBASIC19.32■□□□□ 0.68
Polr1aO35134 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Polr1aO35134 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Polr1aO35134 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Polr1aO35134 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Polr1aO35134 Gm22138-201ENSMUST00000158748 128 ntBASIC19.32■□□□□ 0.68
Polr1aO35134 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Polr1aO35134 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC19.32■□□□□ 0.68
Polr1aO35134 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC19.32■□□□□ 0.68
Polr1aO35134 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC19.32■□□□□ 0.68
Polr1aO35134 CT485607.1-201ENSMUST00000216100 85 ntBASIC19.32■□□□□ 0.68
Polr1aO35134 Gm5705-201ENSMUST00000066241 711 ntBASIC19.32■□□□□ 0.68
Polr1aO35134 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC19.32■□□□□ 0.68
Polr1aO35134 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr1aO35134 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC19.32■□□□□ 0.68
Polr1aO35134 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Polr1aO35134 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Polr1aO35134 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Polr1aO35134 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms