Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC9.89□□□□□ -0.83
MsmbO08540 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.89□□□□□ -0.83
MsmbO08540 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.89□□□□□ -0.83
MsmbO08540 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC9.89□□□□□ -0.83
MsmbO08540 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
MsmbO08540 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
MsmbO08540 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
MsmbO08540 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC9.88□□□□□ -0.83
MsmbO08540 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
MsmbO08540 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
MsmbO08540 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC9.88□□□□□ -0.83
MsmbO08540 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC9.88□□□□□ -0.83
MsmbO08540 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
MsmbO08540 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC9.88□□□□□ -0.83
MsmbO08540 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC9.88□□□□□ -0.83
MsmbO08540 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.88□□□□□ -0.83
MsmbO08540 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
MsmbO08540 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Gm25261-201ENSMUST00000157416 134 ntBASIC9.88□□□□□ -0.83
MsmbO08540 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Gm37042-201ENSMUST00000193816 581 ntBASIC9.88□□□□□ -0.83
MsmbO08540 Gm42693-201ENSMUST00000196779 631 ntBASIC9.88□□□□□ -0.83
MsmbO08540 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.88□□□□□ -0.83
MsmbO08540 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
MsmbO08540 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC9.88□□□□□ -0.83
MsmbO08540 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
MsmbO08540 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
MsmbO08540 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
MsmbO08540 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC9.88□□□□□ -0.83
MsmbO08540 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
MsmbO08540 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
MsmbO08540 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
MsmbO08540 Gm8798-201ENSMUST00000211877 1661 ntBASIC9.87□□□□□ -0.83
MsmbO08540 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MsmbO08540 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MsmbO08540 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MsmbO08540 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MsmbO08540 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
MsmbO08540 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MsmbO08540 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.87□□□□□ -0.83
MsmbO08540 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MsmbO08540 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MsmbO08540 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
MsmbO08540 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.87□□□□□ -0.83
MsmbO08540 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
MsmbO08540 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MsmbO08540 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms