Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pcdh1F7BJK1 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Gm14719-201ENSMUST00000121891 340 ntBASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Gm24694-201ENSMUST00000180054 110 ntBASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Gm27663-201ENSMUST00000184839 110 ntBASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Pcdh1F7BJK1 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Gm20949-201ENSMUST00000206478 952 ntBASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Paupar-201ENSMUST00000194826 3482 ntBASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Pcdh1F7BJK1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms