Protein–RNA interactions for Protein: F6U473

Gm28305, Predicted gene 28305 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28305F6U473 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28305F6U473 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28305F6U473 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28305F6U473 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28305F6U473 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28305F6U473 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28305F6U473 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28305F6U473 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Gm28305F6U473 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.34□□□□□ -0.91
Gm28305F6U473 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Gm28305F6U473 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28305F6U473 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Gm28305F6U473 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Gm28305F6U473 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Gm28305F6U473 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.34□□□□□ -0.92
Gm28305F6U473 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.92
Gm28305F6U473 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.92
Gm28305F6U473 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.33□□□□□ -0.92
Gm28305F6U473 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Gm16198-201ENSMUST00000118766 670 ntBASIC9.33□□□□□ -0.92
Gm28305F6U473 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Gm19931-201ENSMUST00000198920 368 ntBASIC9.33□□□□□ -0.92
Gm28305F6U473 AC153881.2-201ENSMUST00000214877 204 ntBASIC9.33□□□□□ -0.92
Gm28305F6U473 Gm5364-201ENSMUST00000216789 889 ntBASIC9.33□□□□□ -0.92
Gm28305F6U473 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Gm2128-201ENSMUST00000108009 2560 ntBASIC9.33□□□□□ -0.92
Gm28305F6U473 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Gm28305F6U473 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Gm28305F6U473 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Gm28305F6U473 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Gm28305F6U473 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.32□□□□□ -0.92
Gm28305F6U473 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC9.32□□□□□ -0.92
Gm28305F6U473 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC9.32□□□□□ -0.92
Gm28305F6U473 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
Gm28305F6U473 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC9.32□□□□□ -0.92
Gm28305F6U473 Gm27920-201ENSMUST00000183953 96 ntBASIC9.32□□□□□ -0.92
Gm28305F6U473 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC9.32□□□□□ -0.92
Gm28305F6U473 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC9.32□□□□□ -0.92
Gm28305F6U473 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Gm28305F6U473 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Gm28305F6U473 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms