Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 Gm13408-201ENSMUST00000119822 798 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 Gm14704-201ENSMUST00000120300 874 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 Gm13935-201ENSMUST00000121859 798 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Gm9540-201ENSMUST00000188230 478 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 Gm45433-201ENSMUST00000209386 247 ntBASIC11.5□□□□□ -0.57
Shank1D3YZU1 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.5□□□□□ -0.57
Shank1D3YZU1 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shank1D3YZU1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Gm6963-201ENSMUST00000147879 379 ntBASIC11.49□□□□□ -0.57
Shank1D3YZU1 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.49□□□□□ -0.57
Shank1D3YZU1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shank1D3YZU1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Gm5904-201ENSMUST00000210286 865 ntBASIC11.48□□□□□ -0.57
Shank1D3YZU1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.48□□□□□ -0.57
Shank1D3YZU1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.48□□□□□ -0.57
Shank1D3YZU1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.48□□□□□ -0.57
Shank1D3YZU1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Gm11930-201ENSMUST00000117788 190 ntBASIC11.48□□□□□ -0.57
Shank1D3YZU1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Gm45219-201ENSMUST00000205602 465 ntBASIC11.48□□□□□ -0.57
Shank1D3YZU1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.48□□□□□ -0.57
Shank1D3YZU1 Spcs1-203ENSMUST00000226374 592 ntBASIC11.48□□□□□ -0.57
Shank1D3YZU1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Shank1D3YZU1 Matn2-206ENSMUST00000228570 2798 ntBASIC11.48□□□□□ -0.57
Shank1D3YZU1 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms