Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gm12887B1AVM1 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Gm15467-201ENSMUST00000120582 445 ntBASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Gm3436-201ENSMUST00000179930 840 ntBASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Gm27622-201ENSMUST00000183779 60 ntBASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Gm19184-201ENSMUST00000196798 928 ntBASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 AC154846.1-201ENSMUST00000226278 862 ntBASIC10.36□□□□□ -0.75
Gm12887B1AVM1 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Gm5161-201ENSMUST00000075243 853 ntBASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gm12887B1AVM1 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Gm10253-201ENSMUST00000194270 940 ntBASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Gm12887B1AVM1 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms