Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 AC154747.3-201ENSMUST00000224471 3470 ntBASIC10.82□□□□□ -0.68
Col6a4A2AX52 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.82□□□□□ -0.68
Col6a4A2AX52 Gm11667-201ENSMUST00000119828 486 ntBASIC10.82□□□□□ -0.68
Col6a4A2AX52 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Gm19353-201ENSMUST00000184561 445 ntBASIC10.82□□□□□ -0.68
Col6a4A2AX52 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Spcs1-203ENSMUST00000226374 592 ntBASIC10.82□□□□□ -0.68
Col6a4A2AX52 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Gm9867-201ENSMUST00000192212 2647 ntBASIC10.82□□□□□ -0.68
Col6a4A2AX52 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.82□□□□□ -0.68
Col6a4A2AX52 Cog3-203ENSMUST00000227473 4197 ntBASIC10.82□□□□□ -0.68
Col6a4A2AX52 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Col6a4A2AX52 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Gm5070-201ENSMUST00000177599 862 ntBASIC10.81□□□□□ -0.68
Col6a4A2AX52 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Gm12015-201ENSMUST00000117065 843 ntBASIC10.81□□□□□ -0.68
Col6a4A2AX52 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
Col6a4A2AX52 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.81□□□□□ -0.68
Col6a4A2AX52 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 AC159103.1-201ENSMUST00000228325 429 ntBASIC10.81□□□□□ -0.68
Col6a4A2AX52 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Col6a4A2AX52 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 AC122197.2-201ENSMUST00000219196 1635 ntBASIC10.8□□□□□ -0.68
Col6a4A2AX52 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.8□□□□□ -0.68
Col6a4A2AX52 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Col6a4A2AX52 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms