Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Itgad-201ENSMUST00000033051 3965 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Gm5184-201ENSMUST00000220417 1702 ntBASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Gm8337-201ENSMUST00000187358 1938 ntBASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 Gm10417-201ENSMUST00000194341 3522 ntBASIC6.19□□□□□ -1.42
Gm3880A0A1B0GSB3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Enah-211ENSMUST00000193703 11229 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 AC164565.1-201ENSMUST00000217520 1484 ntBASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Tanc1-203ENSMUST00000112568 7422 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Gm15378-201ENSMUST00000121894 207 ntBASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Gm37722-201ENSMUST00000193757 208 ntBASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Gm44719-201ENSMUST00000206404 149 ntBASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Gm42141-201ENSMUST00000196534 2172 ntBASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Gm3880A0A1B0GSB3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms