Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 AC131586.1-201ENSMUST00000228844 2964 ntBASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav8-1A0A075B641 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 AC159195.1-201ENSMUST00000225867 2086 ntBASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm5466-201ENSMUST00000119395 1890 ntBASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 BC001981-202ENSMUST00000191393 1545 ntBASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm17271-201ENSMUST00000165535 355 ntBASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 AA619741-201ENSMUST00000195095 646 ntBASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm43073-201ENSMUST00000198200 1189 ntBASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 AC090659.1-201ENSMUST00000224334 768 ntBASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav8-1A0A075B641 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Trav8-1A0A075B641 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms