Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Gm8738-201ENSMUST00000172606 329 ntBASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Gm37008-201ENSMUST00000195712 319 ntBASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Gm19309-201ENSMUST00000218295 205 ntBASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Upk3aQ9JKX8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Upk3aQ9JKX8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Upk3aQ9JKX8 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Gm12957-201ENSMUST00000117835 377 ntBASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Gm13492-201ENSMUST00000119772 665 ntBASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Gm24548-201ENSMUST00000158650 108 ntBASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Gm19184-201ENSMUST00000196798 928 ntBASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Gm5781-201ENSMUST00000219792 443 ntBASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Upk3aQ9JKX8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms