Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.68□□□□□ -0.38
OtofQ9ESF1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.68□□□□□ -0.38
OtofQ9ESF1 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
OtofQ9ESF1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.68□□□□□ -0.38
OtofQ9ESF1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.68□□□□□ -0.38
OtofQ9ESF1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Gm12176-201ENSMUST00000121420 875 ntBASIC12.67□□□□□ -0.38
OtofQ9ESF1 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Gm8913-201ENSMUST00000209491 641 ntBASIC12.67□□□□□ -0.38
OtofQ9ESF1 Gm13097-201ENSMUST00000210722 397 ntBASIC12.67□□□□□ -0.38
OtofQ9ESF1 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.67□□□□□ -0.38
OtofQ9ESF1 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.67□□□□□ -0.38
OtofQ9ESF1 Gm16505-201ENSMUST00000179981 232 ntBASIC12.67□□□□□ -0.38
OtofQ9ESF1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Gzmn-202ENSMUST00000225535 989 ntBASIC12.67□□□□□ -0.38
OtofQ9ESF1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
OtofQ9ESF1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.66□□□□□ -0.38
OtofQ9ESF1 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.66□□□□□ -0.38
OtofQ9ESF1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.66□□□□□ -0.38
OtofQ9ESF1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.66□□□□□ -0.38
OtofQ9ESF1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.66□□□□□ -0.38
OtofQ9ESF1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
OtofQ9ESF1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms