Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Gm5638-201ENSMUST00000118618 1258 ntBASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Gm13350-201ENSMUST00000120519 479 ntBASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Gm37259-201ENSMUST00000193903 849 ntBASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Gm5950-201ENSMUST00000213337 772 ntBASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ube3bQ9ES34 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 AC167669.2-201ENSMUST00000224417 1620 ntBASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Gm11531-201ENSMUST00000117614 555 ntBASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube3bQ9ES34 Gm37744-201ENSMUST00000194616 1590 ntBASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Gm38319-201ENSMUST00000194537 1266 ntBASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube3bQ9ES34 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube3bQ9ES34 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms