Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tubb3Q9ERD7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Gm24644-201ENSMUST00000157114 139 ntBASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Itm2b-204ENSMUST00000228637 783 ntBASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Gm9899-201ENSMUST00000065519 555 ntBASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Gm10012-201ENSMUST00000078252 192 ntBASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tubb3Q9ERD7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tubb3Q9ERD7 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.77□□□□□ -0.36
Tubb3Q9ERD7 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Tubb3Q9ERD7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.77□□□□□ -0.36
Tubb3Q9ERD7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Tubb3Q9ERD7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Tubb3Q9ERD7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tubb3Q9ERD7 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Gm12957-201ENSMUST00000117835 377 ntBASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Mir1938-201ENSMUST00000158746 100 ntBASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Gm26315-201ENSMUST00000083890 321 ntBASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tubb3Q9ERD7 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tubb3Q9ERD7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms