Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Upk1aQ9D132 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Gm5867-201ENSMUST00000063197 592 ntBASIC12.16□□□□□ -0.46
Upk1aQ9D132 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk1aQ9D132 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Syt7-204ENSMUST00000223586 1344 ntBASIC12.15□□□□□ -0.46
Upk1aQ9D132 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk1aQ9D132 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.15□□□□□ -0.46
Upk1aQ9D132 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.15□□□□□ -0.46
Upk1aQ9D132 Gm44872-201ENSMUST00000207864 420 ntBASIC12.15□□□□□ -0.46
Upk1aQ9D132 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.15□□□□□ -0.46
Upk1aQ9D132 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk1aQ9D132 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk1aQ9D132 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk1aQ9D132 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk1aQ9D132 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Upk1aQ9D132 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk1aQ9D132 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk1aQ9D132 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.14□□□□□ -0.47
Upk1aQ9D132 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.14□□□□□ -0.47
Upk1aQ9D132 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Upk1aQ9D132 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.14□□□□□ -0.47
Upk1aQ9D132 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.14□□□□□ -0.47
Upk1aQ9D132 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.14□□□□□ -0.47
Upk1aQ9D132 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Gm7730-201ENSMUST00000212486 454 ntBASIC12.14□□□□□ -0.47
Upk1aQ9D132 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk1aQ9D132 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk1aQ9D132 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Upk1aQ9D132 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Upk1aQ9D132 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk1aQ9D132 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Upk1aQ9D132 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Upk1aQ9D132 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms