Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Shmt2Q9CZN7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Gm13612-201ENSMUST00000119276 390 ntBASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Shmt2Q9CZN7 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Shmt2Q9CZN7 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt2Q9CZN7 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt2Q9CZN7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt2Q9CZN7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.27□□□□□ -0.44
Shmt2Q9CZN7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt2Q9CZN7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt2Q9CZN7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Shmt2Q9CZN7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.27□□□□□ -0.44
Shmt2Q9CZN7 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Shmt2Q9CZN7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms