Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Gm42599-201ENSMUST00000201308 469 ntBASIC12.75□□□□□ -0.37
Ssu72Q9CY97 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.75□□□□□ -0.37
Ssu72Q9CY97 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.74□□□□□ -0.37
Ssu72Q9CY97 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Gm6458-201ENSMUST00000211573 635 ntBASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ssu72Q9CY97 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Gm5354-201ENSMUST00000182417 973 ntBASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ssu72Q9CY97 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ssu72Q9CY97 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms