Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ddx47Q9CWX9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Ddx47Q9CWX9 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ddx47Q9CWX9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Gm12485-201ENSMUST00000119641 291 ntBASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Gm27390-201ENSMUST00000184516 176 ntBASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Gm17795-201ENSMUST00000214505 757 ntBASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx47Q9CWX9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms