Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Gm5354-201ENSMUST00000182417 973 ntBASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Gm43094-201ENSMUST00000196549 921 ntBASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Ska1Q9CPV1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Gm15321-201ENSMUST00000121290 288 ntBASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Gm26464-201ENSMUST00000157094 305 ntBASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Gm19220-201ENSMUST00000222682 803 ntBASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.16□□□□□ -0.46
Ska1Q9CPV1 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ska1Q9CPV1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.15□□□□□ -0.46
Ska1Q9CPV1 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ska1Q9CPV1 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms