Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Rims2-204ENSMUST00000226410 3685 ntBASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gtf2a1Q99PM3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 AC125374.1-201ENSMUST00000213573 1400 ntBASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Gm5035-201ENSMUST00000215581 927 ntBASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gtf2a1Q99PM3 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Gm15565-201ENSMUST00000118890 427 ntBASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gtf2a1Q99PM3 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Gtf2a1Q99PM3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms