Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Scrt1Q99M85 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm24830-201ENSMUST00000102024 166 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm24514-201ENSMUST00000174961 285 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm25890-201ENSMUST00000177643 165 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm22614-201ENSMUST00000178300 165 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm44069-201ENSMUST00000204898 506 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm19163-201ENSMUST00000223313 780 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm22042-201ENSMUST00000082989 165 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm26232-201ENSMUST00000083360 166 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm24136-201ENSMUST00000083374 165 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm26110-201ENSMUST00000083971 165 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.29□□□□□ -0.6
Scrt1Q99M85 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Scrt1Q99M85 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.28□□□□□ -0.6
Scrt1Q99M85 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm37986-201ENSMUST00000193285 383 ntBASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm42997-202ENSMUST00000200321 985 ntBASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.28□□□□□ -0.6
Scrt1Q99M85 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms