Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lims1Q99JW4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.71□□□□□ -0.53
Lims1Q99JW4 Gm14760-201ENSMUST00000121831 999 ntBASIC11.71□□□□□ -0.53
Lims1Q99JW4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Gm18624-201ENSMUST00000220966 658 ntBASIC11.71□□□□□ -0.53
Lims1Q99JW4 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11.71□□□□□ -0.53
Lims1Q99JW4 Mir339-201ENSMUST00000083659 96 ntBASIC11.71□□□□□ -0.53
Lims1Q99JW4 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lims1Q99JW4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lims1Q99JW4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lims1Q99JW4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Gm6152-201ENSMUST00000151704 340 ntBASIC11.7□□□□□ -0.54
Lims1Q99JW4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lims1Q99JW4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.7□□□□□ -0.54
Lims1Q99JW4 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Gm18473-201ENSMUST00000220543 868 ntBASIC11.7□□□□□ -0.54
Lims1Q99JW4 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lims1Q99JW4 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms