Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb4Q91XZ6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdhb4Q91XZ6 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Gm5687-201ENSMUST00000118252 640 ntBASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Gm45668-201ENSMUST00000211271 493 ntBASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdhb4Q91XZ6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdhb4Q91XZ6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms