Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Gm11930-201ENSMUST00000117788 190 ntBASIC13.71□□□□□ -0.21
TraipQ8VIG6 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.71□□□□□ -0.21
TraipQ8VIG6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.71□□□□□ -0.21
TraipQ8VIG6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Gm37160-201ENSMUST00000193081 1689 ntBASIC13.71□□□□□ -0.21
TraipQ8VIG6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TraipQ8VIG6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.71□□□□□ -0.22
TraipQ8VIG6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
TraipQ8VIG6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TraipQ8VIG6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TraipQ8VIG6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TraipQ8VIG6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TraipQ8VIG6 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TraipQ8VIG6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TraipQ8VIG6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TraipQ8VIG6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TraipQ8VIG6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm25214-201ENSMUST00000104573 129 ntBASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm15808-201ENSMUST00000119046 604 ntBASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm15703-201ENSMUST00000120250 880 ntBASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.7□□□□□ -0.22
TraipQ8VIG6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm17376-201ENSMUST00000166016 84 ntBASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm6098-201ENSMUST00000180234 330 ntBASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm8885-201ENSMUST00000189382 598 ntBASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.7□□□□□ -0.22
TraipQ8VIG6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TraipQ8VIG6 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TraipQ8VIG6 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms