Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Gm44942-201ENSMUST00000096093 2072 ntBASIC13□□□□□ -0.33
Rpa1Q8VEE4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rpa1Q8VEE4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Gm24447-201ENSMUST00000083977 338 ntBASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rpa1Q8VEE4 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Gm15693-201ENSMUST00000120470 637 ntBASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rpa1Q8VEE4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rpa1Q8VEE4 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms