Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Gm5425-201ENSMUST00000214125 459 ntBASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Slf1Q8R3P9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Gm4875-201ENSMUST00000118257 786 ntBASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.98□□□□□ -0.33
Slf1Q8R3P9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Slf1Q8R3P9 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Map1b-203ENSMUST00000223725 2669 ntBASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Slf1Q8R3P9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms