Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.48□□□□□ -0.09
Syne4Q8CII8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Gm23949-201ENSMUST00000104027 127 ntBASIC14.48□□□□□ -0.09
Syne4Q8CII8 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.48□□□□□ -0.09
Syne4Q8CII8 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.48□□□□□ -0.09
Syne4Q8CII8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.48□□□□□ -0.09
Syne4Q8CII8 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm14644-201ENSMUST00000116671 647 ntBASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm13315-201ENSMUST00000120376 991 ntBASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm11450-201ENSMUST00000121144 333 ntBASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm19459-201ENSMUST00000176240 835 ntBASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm28071-201ENSMUST00000190355 478 ntBASIC14.47□□□□□ -0.09
Syne4Q8CII8 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.47□□□□□ -0.09
Syne4Q8CII8 AY036118-201ENSMUST00000200021 923 ntBASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm44126-201ENSMUST00000204831 514 ntBASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm44545-201ENSMUST00000208262 746 ntBASIC14.47□□□□□ -0.09
Syne4Q8CII8 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC14.47□□□□□ -0.09
Syne4Q8CII8 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.47□□□□□ -0.09
Syne4Q8CII8 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Ntng1-201ENSMUST00000051253 327 ntBASIC14.47□□□□□ -0.09
Syne4Q8CII8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.47□□□□□ -0.09
Syne4Q8CII8 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.47□□□□□ -0.09
Syne4Q8CII8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Syne4Q8CII8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.46□□□□□ -0.09
Syne4Q8CII8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.46□□□□□ -0.09
Syne4Q8CII8 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Gm15432-201ENSMUST00000121106 195 ntBASIC14.46□□□□□ -0.09
Syne4Q8CII8 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.46□□□□□ -0.09
Syne4Q8CII8 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.46□□□□□ -0.09
Syne4Q8CII8 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Syne4Q8CII8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.46□□□□□ -0.09
Syne4Q8CII8 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.46□□□□□ -0.09
Syne4Q8CII8 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Syne4Q8CII8 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Syne4Q8CII8 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Syne4Q8CII8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Syne4Q8CII8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Syne4Q8CII8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Syne4Q8CII8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.46□□□□□ -0.1
Syne4Q8CII8 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Syne4Q8CII8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Syne4Q8CII8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.45□□□□□ -0.1
Syne4Q8CII8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms