Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sox30Q8CGW4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Gm16215-201ENSMUST00000161990 637 ntBASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Gm18624-201ENSMUST00000220966 658 ntBASIC14.02□□□□□ -0.17
Sox30Q8CGW4 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Gm5867-201ENSMUST00000063197 592 ntBASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sox30Q8CGW4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Gm11637-201ENSMUST00000120601 592 ntBASIC14.01□□□□□ -0.17
Sox30Q8CGW4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Sox30Q8CGW4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Sox30Q8CGW4 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Sox30Q8CGW4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sox30Q8CGW4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sox30Q8CGW4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14□□□□□ -0.17
Sox30Q8CGW4 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Sox30Q8CGW4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Sox30Q8CGW4 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 Gm10156-201ENSMUST00000122364 462 ntBASIC14□□□□□ -0.17
Sox30Q8CGW4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14□□□□□ -0.17
Sox30Q8CGW4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14□□□□□ -0.17
Sox30Q8CGW4 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sox30Q8CGW4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14□□□□□ -0.17
Sox30Q8CGW4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sox30Q8CGW4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms