Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ccdc28bQ8CEG5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Gm12485-201ENSMUST00000119641 291 ntBASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Chchd1-203ENSMUST00000224633 557 ntBASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ccdc28bQ8CEG5 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc28bQ8CEG5 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc28bQ8CEG5 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc28bQ8CEG5 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc28bQ8CEG5 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc28bQ8CEG5 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc28bQ8CEG5 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc28bQ8CEG5 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.71□□□□□ -0.38
Ccdc28bQ8CEG5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Ccdc28bQ8CEG5 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.7□□□□□ -0.38
Ccdc28bQ8CEG5 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc28bQ8CEG5 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms