Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lrif1Q8CDD9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm14928-201ENSMUST00000120198 477 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm12403-201ENSMUST00000121384 959 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm12091-201ENSMUST00000146791 830 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm6745-201ENSMUST00000199216 526 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm7653-201ENSMUST00000214567 508 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lrif1Q8CDD9 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Gm5279-201ENSMUST00000199575 745 ntBASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Gm18905-201ENSMUST00000205454 928 ntBASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Gm17795-201ENSMUST00000214505 757 ntBASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Gm6180-201ENSMUST00000065243 498 ntBASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Lrif1Q8CDD9 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrif1Q8CDD9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.71□□□□□ -0.38
Lrif1Q8CDD9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.71□□□□□ -0.38
Lrif1Q8CDD9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Lrif1Q8CDD9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrif1Q8CDD9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Lrif1Q8CDD9 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrif1Q8CDD9 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Lrif1Q8CDD9 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Lrif1Q8CDD9 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.71□□□□□ -0.38
Lrif1Q8CDD9 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrif1Q8CDD9 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Lrif1Q8CDD9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.7□□□□□ -0.38
Lrif1Q8CDD9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lrif1Q8CDD9 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Lrif1Q8CDD9 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.7□□□□□ -0.38
Lrif1Q8CDD9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms