Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lysmd4Q8CC84 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Gm10576-201ENSMUST00000191927 825 ntBASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lysmd4Q8CC84 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Gm12291-201ENSMUST00000121627 311 ntBASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.5□□□□□ -0.57
Lysmd4Q8CC84 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms