Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Gm22323-201ENSMUST00000103832 109 ntBASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Gm13492-201ENSMUST00000119772 665 ntBASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Mospd4-201ENSMUST00000180618 576 ntBASIC14.86□□□□□ -0.03
Shisa4Q8CA71 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Gm10608-202ENSMUST00000213924 676 ntBASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Gm39404-201ENSMUST00000216350 313 ntBASIC14.86□□□□□ -0.03
Shisa4Q8CA71 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa4Q8CA71 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Gm15370-201ENSMUST00000117158 253 ntBASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Gm6621-201ENSMUST00000193251 772 ntBASIC14.85□□□□□ -0.03
Shisa4Q8CA71 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.85□□□□□ -0.03
Shisa4Q8CA71 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa4Q8CA71 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Gm11531-201ENSMUST00000117614 555 ntBASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Gm5950-201ENSMUST00000213337 772 ntBASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Morn2-202ENSMUST00000227729 656 ntBASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Gm26035-201ENSMUST00000083065 308 ntBASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa4Q8CA71 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms