Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Tsen54Q8C2A2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tsen54Q8C2A2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Gm7820-201ENSMUST00000121012 1052 ntBASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Gm43703-201ENSMUST00000200523 763 ntBASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Tsen54Q8C2A2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Gm12585-201ENSMUST00000117307 290 ntBASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Gm15460-201ENSMUST00000118147 391 ntBASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Gm15393-201ENSMUST00000120499 219 ntBASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Gm27838-201ENSMUST00000184829 128 ntBASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 AC154806.6-201ENSMUST00000228192 202 ntBASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.76□□□□□ -0.69
Tsen54Q8C2A2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms