Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
SprnQ8BWU1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Gm12485-201ENSMUST00000119641 291 ntBASIC11.35□□□□□ -0.59
SprnQ8BWU1 Gm12138-201ENSMUST00000122180 951 ntBASIC11.35□□□□□ -0.59
SprnQ8BWU1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Gm21854-201ENSMUST00000179901 471 ntBASIC11.35□□□□□ -0.59
SprnQ8BWU1 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Gm17795-201ENSMUST00000214505 757 ntBASIC11.35□□□□□ -0.59
SprnQ8BWU1 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.35□□□□□ -0.59
SprnQ8BWU1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
SprnQ8BWU1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Gm15376-201ENSMUST00000122258 783 ntBASIC11.34□□□□□ -0.59
SprnQ8BWU1 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Gm26464-201ENSMUST00000157094 305 ntBASIC11.34□□□□□ -0.59
SprnQ8BWU1 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Gm28760-201ENSMUST00000185995 736 ntBASIC11.34□□□□□ -0.59
SprnQ8BWU1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.34□□□□□ -0.59
SprnQ8BWU1 Gm8227-201ENSMUST00000223306 571 ntBASIC11.34□□□□□ -0.59
SprnQ8BWU1 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.34□□□□□ -0.59
SprnQ8BWU1 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
SprnQ8BWU1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms