Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Nup54Q8BTS4 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nup54Q8BTS4 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Nup54Q8BTS4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Nup54Q8BTS4 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Mir1247-201ENSMUST00000116706 82 ntBASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Gm13492-201ENSMUST00000119772 665 ntBASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.13□□□□□ -0.31
Nup54Q8BTS4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Nup54Q8BTS4 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms