Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gm29541-201ENSMUST00000191351 678 ntBASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gm9229-201ENSMUST00000222777 126 ntBASIC10.57□□□□□ -0.72
Smco3Q8BQM7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smco3Q8BQM7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Gm14494-201ENSMUST00000118786 435 ntBASIC10.56□□□□□ -0.72
Smco3Q8BQM7 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Gm46209-201ENSMUST00000217912 553 ntBASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smco3Q8BQM7 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC10.55□□□□□ -0.72
Smco3Q8BQM7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms