Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm6983-201ENSMUST00000214912 628 ntBASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Gm19220-201ENSMUST00000222682 803 ntBASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Itm2b-204ENSMUST00000228637 783 ntBASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Cdhr3Q8BL00 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Gm13813-201ENSMUST00000120998 787 ntBASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Gm9061-201ENSMUST00000182707 1006 ntBASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Gm44069-201ENSMUST00000204898 506 ntBASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Gm18307-201ENSMUST00000206864 949 ntBASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Gm44872-201ENSMUST00000207864 420 ntBASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Gm6458-201ENSMUST00000211573 635 ntBASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Cdhr3Q8BL00 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdhr3Q8BL00 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cdhr3Q8BL00 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdhr3Q8BL00 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdhr3Q8BL00 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Cdhr3Q8BL00 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdhr3Q8BL00 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdhr3Q8BL00 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.21□□□□□ -0.62
Cdhr3Q8BL00 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdhr3Q8BL00 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Cdhr3Q8BL00 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
Cdhr3Q8BL00 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Gm3365-201ENSMUST00000216296 1480 ntBASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms