Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gm11960-202ENSMUST00000181063 2858 ntBASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.57□□□□□ -0.72
Smg1Q8BKX6 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gm14999-201ENSMUST00000121039 624 ntBASIC10.57□□□□□ -0.72
Smg1Q8BKX6 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gm5298-201ENSMUST00000201122 892 ntBASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Smg1Q8BKX6 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gm6485-201ENSMUST00000160676 439 ntBASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gm39404-201ENSMUST00000216350 313 ntBASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gm5455-201ENSMUST00000058710 715 ntBASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gm15003-201ENSMUST00000118884 446 ntBASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gm17798-201ENSMUST00000182282 1035 ntBASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Smg1Q8BKX6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms