Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Gm20445-201ENSMUST00000061905 565 ntBASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim6Q8BGE7 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Gm21854-201ENSMUST00000179901 471 ntBASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.66□□□□□ -0.22
Trim6Q8BGE7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Gm15376-201ENSMUST00000122258 783 ntBASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim6Q8BGE7 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms