Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Gm30285-201ENSMUST00000214614 422 ntBASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Prpf40bQ80W14 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.85□□□□□ -0.03
Prpf40bQ80W14 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Gm5781-201ENSMUST00000219792 443 ntBASIC14.84□□□□□ -0.03
Prpf40bQ80W14 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Prpf40bQ80W14 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf40bQ80W14 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf40bQ80W14 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf40bQ80W14 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Prpf40bQ80W14 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Prpf40bQ80W14 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf40bQ80W14 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Prpf40bQ80W14 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms